Sequencing and assembly of multiple Bacteroides sp. genomes for the H... - SRA

SRX005947: Sequencing and assembly of multiple Bacteroides sp. genomes for the HMP Jumpstart project.
1 LS454 (454 GS FLX Titanium) run: 4,895 spots, 2.9M bases, 6.1Mb downloads

UUID: 79d52ea9-8873-4c40-a679-5821bb80b9c2

Design: 10X fragment and 10X physical paired on 454

Submitted by: Broad Institute (BI)

Study: Reference genome for the Human Microbiome Project

PRJNA38771 • SRP002502 • All experiments • All runs

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<b><i>Bacteroides</i> sp. 3_1_23</b>. This strain is from the human gastrointestinal tract. This genome will be used for comparative analysis.

Sample: Generic sample from Bacteroides sp. 3_1_23

SAMN00103200 • SRS004179 • All experiments • All runs

Organism: Bacteroides sp. 3_1_23

Library:

Name: 454-2826

Instrument: 454 GS FLX Titanium

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
Tokyo	TATTCGTC

13 forward

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: Bacterial 454 Assembly

gssr_id: 16660.1

lsid: BROAD:SEQUENCING_SAMPLE:16660.1

material_type: Genomic DNA

project: G4026

work_request: 19372

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-07-02 13:21:59.0	454BaseCaller	2.0.00.22

Runs: 1 run, 4,895 spots, 2.9M bases, 6.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR139039	4,895	2.9M	6.1Mb	2011-03-27

ID:: 6206

SRA

Sequence Read Archive

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